KEGG   Caenorhabditis elegans (nematode): CELE_T19E7.2
Entry
CELE_T19E7.2      CDS       T00019                                 
Symbol
skn-1
Name
(RefSeq) Protein skinhead-1
  KO
K05638  nuclear factor erythroid 2-related factor 2
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel04141  Protein processing in endoplasmic reticulum
cel04212  Longevity regulating pathway - worm
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    CELE_T19E7.2 (skn-1)
 09150 Organismal Systems
  09149 Aging
   04212 Longevity regulating pathway - worm
    CELE_T19E7.2 (skn-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cel03000]
    CELE_T19E7.2 (skn-1)
   03029 Mitochondrial biogenesis [BR:cel03029]
    CELE_T19E7.2 (skn-1)
Transcription factors [BR:cel03000]
 Eukaryotic type
  Basic leucine zipper (bZIP)
   AP-1(-like) components, NF-E2
    CELE_T19E7.2 (skn-1)
Mitochondrial biogenesis [BR:cel03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Nuclear respiratory factors
    CELE_T19E7.2 (skn-1)
SSDB
Motif
Pfam: bZIP_Maf bZIP_1 PhaC_N
Other DBs
NCBI-GeneID: 177343
NCBI-ProteinID: NP_741404
WormBase: WBGene00004804
UniProt: P34707
Structure
Position
IV:complement(<5651039..>5660384)
AA seq 623 aa
MGGSSRRQRSTSATRRDDKRRRRQCFSSVADDEEETTSIYGVSSIFIWILATSSLILVIS
SPSSNTSIQSSSYDRITTKHLLDNISPTFKMYTDSNNRNFDEVNHQHQQEQDFNGQSKYD
YPQFNRPMGLRWRDDQRMMEYFMSNGPVETVPVMPILTEHPPASPFGRGPSTERPTTSSR
YEYSSPSLEDIDLIDVLWRSDIAGEKGTRQVAPADQYECDLQTLTEKSTVAPLTAEENAR
YEDLSKGFYNGFFESFNNNQYQQKHQQQQREQIKTPTLEHPTQKAELEDDLFDEDLAQLF
EDVSREEGQLNQLFDNKQQHPVINNVSLSEGIVYNQANLTEMQEMRDSCNQVSISTIPTT
STAQPETLFNVTDSQTVEQWLPTEVVPNDVFPTSNYAYIGMQNDSLQAVVSNGQIDYDHS
YQSTGQTPLSPLIIGSSGRQQQTQTSPGSVTVTATATQSLFDPYHSQRHSFSDCTTDSSS
TCSRLSSESPRYTSESSTGTHESRFYGKLAPSSGSRYQRSSSPRSSQSSIKIARVVPLAS
GQRKRGRQSKDEQLASDNELPVSAFQISEMSLSELQQVLKNESLSEYQRQLIRKIRRRGK
NKVAARTCRQRRTDRHDKMSHYI
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgggcggttcatcacgccgtcagcgaagtacgtcggcgacgagacgagacgataaacga
agacgaagacagtgcttctcttcggtagccgacgacgaagaagagacgacgtcaatttat
ggagtgtcgtccatattcatctggatacttgcaacatcatcactgattttggtgatcagt
tcaccatcgtccaacacctcaatccaatcatcgtcatacgatcggatcacgacaaaacat
cttctggacaatatatcaccgacatttaaaatgtacacggacagcaataataggaacttt
gatgaagtcaaccatcagcatcaacaagaacaagatttcaatggccaatccaaatatgat
tatccacaattcaaccgtccaatgggtctccgttggcgtgatgatcaacggatgatggag
tatttcatgtcgaatggtccagtagaaactgttccagttatgccaatactcaccgagcat
ccaccagcatctccattcggtagaggaccatctacagaacgtccaaccacatcatctcga
tacgagtacagttcgccttctctcgaggatatcgacttgattgatgtgctatggagaagt
gatattgctggagagaagggcacacgacaagtggctcctgctgatcagtacgaatgtgat
ttgcagacgttgacagagaaatcgacagtagcgccactcactgccgaagagaatgctcga
tatgaagatctttcgaaaggattctataatggattcttcgagtcgttcaataacaatcaa
tatcagcagaaacatcagcaacaacaacgagaacaaataaagacaccaactcttgaacat
ccaactcaaaaagccgaattggaagatgatctgtttgatgaagatcttgctcagcttttc
gaggatgtttcaagagaagaaggacaattgaatcaactttttgataataagcaacaacat
ccagttatcaataatgtttctctgtcggaaggaattgtttataatcaggcaaatttgacc
gagatgcaagagatgcgtgattcctgcaatcaagtttccatttcaacaattccaacaaca
tcgactgctcaaccagagactttgttcaatgtaaccgattcacagactgtcgaacagtgg
cttccaacagaagttgtaccaaacgatgtgttcccaacatccaactacgcctacattgga
atgcaaaacgacagtcttcaagcagttgtatcaaatggacagattgactatgatcattcc
tatcaatccactggtcagactccactgtctcctctcatcattggatcttcaggacgtcaa
cagcagactcaaacgagcccaggaagcgtcacagtgactgcaacagctactcaatcgttg
ttcgatccatatcactcacagagacactcgtttagtgattgcactactgattcgtcatca
acgtgctctcgcctctcttcggaatctccacgatacacgtcagagagctcaaccggaact
cacgagtctcgtttctacggaaagttggctccatccagtggatcacgctaccaacgatca
tcgtctccacgttcatcacaatcttcgattaagatcgcgagagttgttccactggccagc
ggacaacggaagcgtggacgtcaatccaaggatgagcagctcgccagtgacaacgagctt
ccagtgtcggcgttccagatttcggagatgtcattaagcgagttgcaacaagtgttgaag
aacgagagtctcagcgagtatcaaagacagttgattcgcaagattcgtcgacgcggaaag
aacaaggttgctgcccgcacttgccgtcaaagacgcacggatcgtcacgacaagatgtcc
cattacatctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
3D Structure (1)   
   PDB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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